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Galaxy/galaxy/tools/radiuma/preprocessing.py

@@ -0,0 +1,47 @@
+from sklearn.utils import resample, shuffle
+
+class preprocessing:
+
+    def __init__(self,X):
+        self.X = X
+
+
+
+    # def SelectAlg(self):
+    #     import json
+    #     f = open('data.json')
+    #     JSONdata = json.load(f)
+    #     f.close()
+    #     algn = self.AlgName
+    #     if self.AlgName == "resample":
+
+    #         self.Vs_resample(
+    #             JSONdata[algn][0],
+    #             JSONdata[algn][1]
+    #         )
+    #     elif self.AlgName == "shuffle":
+    #         self.Vs_shuffle(
+    #             JSONdata[algn][0],
+    #             JSONdata[algn][1]
+    #         )
+    #     else:
+    #         print("Algorithm name is wrong")
+
+
+
+    def Vs_resampling(self,str=False,rep=False):
+
+        if str:
+            x2 = resample(self.X , replace=rep)
+        else:
+            x2 = resample(self.X , replace=rep)
+
+        return x2
+
+
+
+    def Vs_shuffling(self):
+
+        x2 = shuffle(self.X)
+
+        return x2